Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAESPTIRLERYSERHVEGLTALYNDPAVARQVLQMPYQSVEQRRKRLHDSADDDRLLILVALHQGDVIGSASLEQHPRIRRSHSGSIGMGVAVAWQGKGVGSRLLGELLDIADNWMNLRRVELTVYTDNAPALALYRKFGFETEGEMRDYAVRDGRFVDVYSMARLRRVEGRVGE
2VI7 Chain:B ((6-169))
-----PTIRLERYSERHVEGLTALYNDPAVARQVLQMPYQSVEQRRKRLHDS-DDDRLLILVALHQGDVIGSASLEQHPRIRRSHSGSIGMGVAVAWQGKGVGSRLLGELLDIADNWMNLRRVELTVYTDNAPALALYRKFGFETEGEMRDYAVRDGRFVDVYSMARLR--------
General information:
TITO was launched using:
RESULT:
Template:
2VI7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86396 for 1216 contacts (-71.0/contact) +
2D Compatibility (PS) -17557 + (NN) -6998 + (LL) 1072
1D Compatibility (HY) -22400 + (ID) 8050
Total energy: -140329.0 ( -115.40 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_2VI7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VI7-query.scw
PDB file :
Tito_Scwrl_2VI7.pdb
: