Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLKLVQTLAGLLGEGESGKAEVLAVKEGLANNFQVLLKLTLANSGQSLVEVQSNRPLVPGNLLNVSATSNTSVVATLLDSMAGAGPLSSLDLEQLPPGTLLQGKVLSSTALPADKAQQVVYRVLLNLLNTPLAGSKLS---LDSPQALPVGSLLTALVKNSQQIDFLPLSGRLDQLALGQQLAGQSARQASLEGLFAALQGLNGRNDLPDSLRQAVERLFAGLPEAQKMGDSKLLGQALQQSGLFLEARLMQGATDHLGHDLKANLLRLFAQLSPLPPTGAQAPGMFAGNTANLAQALPAFVRNALGNLGQSANKTQALNFPLPSKVLQLFDEDMELESLLRLAAAAISRLQTHQLSSLAQTSTLPDGTQLATWQMEVPMRHQHSVVPLQVKFQEEQRKTGEEARESLWRVELAFDLEPLGPLHAQATLLRGSLSSQLWAERDATARLV-------EHELGHLRQRLRDAGLTVGEITCQRGRPPQGPRATIEQRWVDETA |
| 4QVG Chain:A ((4-344)) | ELSALVPVLF--------GHAAFQQLNAGCQLG--------------------------------------------LFELLHERGPLS-------------AEEVADALRLPRRSADILLLGTTALGLSTVTDGGYRNGAPIGAAFRDGLWPVLRDIVQYQDKIAYQPAADYVESLRTGQN-AGIRHFPGTTRDLYSRLAAVPG----------LEELFYRGMHAWSQLSNPVLLAQ------------------------------PDFTRVHRVLDVGGGD----AVNAVALARAHPSL-------------------------RVTVLDRPGALEVARKTIAEAGLEERVRTHAADIFTDSYPAGHDCVLFAHQLVIWSPEQNLTLLRKAYDA--------------------VEPGGRVLVFNAFTDDDRTGPLYAALDNVYFTTLPFRHSTIHRWADCESWLREAGFT---DVGRTAPPGWTPHGVVSGSRPR--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QVG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14630 for 2592 contacts (-5.6/contact) +
2D Compatibility (PS) -35025 + (NN) -10238 + (LL) 9568
1D Compatibility (HY) -8800 + (ID) 3350
Total energy: -62475.0 ( -24.10 by residue)
QMean score : 0.220
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