Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIACLDLEGVLVPEIWIAFAEKTGIDALKATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFLKASSRSLSL
1RKU Chain:B ((2-206))
MEIACLDLEGVLVPEIWIAFAEKTGIDALKATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFLKASSRSLSL
General information:
TITO was launched using:
RESULT:
Template:
1RKU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -152274 for 1633 contacts (-93.2/contact) +
2D Compatibility (PS) -22182 + (NN) -9544 + (LL) 0
1D Compatibility (HY) -32000 + (ID) 10250
Total energy: -226250.0 ( -138.55 by residue)
QMean score : 0.703
(partial model without unconserved sides chains):
PDB file :
Tito_1RKU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RKU-query.scw
PDB file :
Tito_Scwrl_1RKU.pdb
: