Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTAQLIDGKAIAANLRQQIAQRVTERRQ-QGLRVPGLAVILVGTDPASQVYVAHKRKDCEEVGFLSQAYDLPAETSQDDLLALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIHPDKDVDGFHPYNIGRL--AQRMPLLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHR--FTRDLADHVSRADLVVVAAGKPGLVKGEWIKEGAIVIDVGI------NRQADGRLVGDVEYEVAAQRASWITPVPGGVGPMTRACLLENTLHAAEHLHD |
4A26 Chain:B ((6-292)) | --AQIIDGKAIAAAIRSELKDKVAALRELYGGRVPGLASIIVGQRMDSKKYVQLKHKAAAEVGMASFNVELPEDISQEVLEVNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIHPHKDADALLPVNVGLLHYKGREPPFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTEDMIDYLRTADIVIAAMGQPGYVKGEWIKEGAAVVDVGTTPVPDPS---GYRLVGDVCFEEAAARAAWISPVPGGVGPMTIAMLLENTLEAFKAALG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4A26.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -214943 for 2329 contacts (-92.3/contact) +
2D Compatibility (PS) -29369 + (NN) -9900 + (LL) 624
1D Compatibility (HY) -21200 + (ID) 7200
Total energy: -281988.0 ( -121.08 by residue)
QMean score : 0.581
|
|
|