Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGRTVEDVDMLNHHFR-----VCSATVYRPPGDGCQSATSQPSAWWMAAKESRSGQLRRVEHVAFEGHPAAVLAGRAVEDRAVVGEADGQAEADVG---SVLRGVQLAFEVQLEHARL----DAFQADGDVR-----VVHGLAFAAALLGADGEGHGVSVHVLLQLAWG------RRRQRGGQTTGRRAGWPVLAAVGAARGLGIIRRRRSPTAHHQPTPEGMMKLPVLAVLGAALLLSACAKKEAEACA---SPDV--KDQLMRIFLQGAITERSPEFKDSALRDVAILEKDPDSGVLSCVGTLSVPAGQQVVEGVLQYRIAPVAKSDYDYLLLDTAGANTTALAQRLNKALGQ |
| 4V12 Chain:A ((7-343)) | DTSTLESR--VGHYYQMEDTYLVGREKVREFARAVQDYH---PAHWNLATAADLGHPGLIAPLTFTSAPAMACNQRMFESVVVGYDMYLQTEEVFEQHRPIVEGDELSIDIELTSVRRIAGRDLITVTNTFTDTAGEVVHTLHTTVVGITAEDVDPAIRPAVQGVMMHGINMLGVEETNAPYEKTVRPEGELRIAQGGATRTPTSLNFDDLKVGEELPVHTARLSRGDLVNYAGVAGDANPLHWDENIAKLAGQPDVIAHGMLTMGLGAGFVSSWS---GDPGAITRYAVRLSQPAVVP--------AEGTEIEYSGRIKSLDPETRTGVVIVAAKSGGRKIFGLATATIRFS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16915 for 2473 contacts (-6.8/contact) +
2D Compatibility (PS) -30782 + (NN) 11102 + (LL) 568
1D Compatibility (HY) -400 + (ID) 2550
Total energy: -38977.0 ( -15.76 by residue)
QMean score : 0.114
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