Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------MKFLLIGLIRFYQYAISPLI--GPRCRFYPSCSHYTLEAIRVHGALRGGYLGARRLL----RCHPWHPGGYDPVPERQEQACACHRTAKPGK
1R7L Chain:A ((-6-96))
AMKPRDINKLIASKIFGYEIKDDNIIKDGRYRLGIPLYSQNIESAWQVVEKLEYDVKVTKTDLKPKYQVHVFVPGGVKMVFAETAPMAICKGALASV-
General information:
TITO was launched using:
RESULT:
Template:
1R7L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9041 for 569 contacts (-15.9/contact) +
2D Compatibility (PS) -8211 + (NN) 3019 + (LL) 64
1D Compatibility (HY) 4000 + (ID) 350
Total energy: -10519.0 ( -18.49 by residue)
QMean score : -0.198
(partial model without unconserved sides chains):
PDB file :
Tito_1R7L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R7L-query.scw
PDB file :
Tito_Scwrl_1R7L.pdb
: