Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRAINDPGNEDPGSLLETDADALLGGAAAQAPEERCRLAAQACIRACERYLALCTESSREQRQHAGDCADLCRLAALLLERRSPWAPAACELAARYALACAERCDGDEPLERECAGACRRFVEACRPLLPA
3KAW Chain:A ((32-130))
-------------------------------APEERCRLAAQACIRACERYLALCTESSREQRQHAGDCADLCRLAALLLERRSPWAPAACELAARYALACAERCDGDEPLERECAGACRRFVEACRPLL--
General information:
TITO was launched using:
RESULT:
Template:
3KAW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69104 for 821 contacts (-84.2/contact) +
2D Compatibility (PS) -11407 + (NN) -10199 + (LL) 1056
1D Compatibility (HY) -12400 + (ID) 4950
Total energy: -107004.0 ( -130.33 by residue)
QMean score : 0.701
(partial model without unconserved sides chains):
PDB file :
Tito_3KAW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KAW-query.scw
PDB file :
Tito_Scwrl_3KAW.pdb
: