Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSNAQRALIKATVPLLETGGEALITHFYRTMLGEYPEVRPLFNQAHQASGDQPRALANGVLMYARHIDQLQELGPLVAKVVNKHVSLQVLPEHYPIVGTCLLRAIREVLGEQIATDEVLEAWGAAYQQLADLLIEAEESVYAASAQADGGWRGVRRFRVARKQAESEEITSFYLEPVDGQPLLAFQPGQYIGLRLDID--GEEVRRNYSLSAASNGREYRISVKREAG-----GRVSNYLHDRVAEGDELDLFPPAGDF-VLRDSDKPLVLITAGVGITPALAMLQEALPQARP--IRFIHCARHGGVHAFRDWIEDVSAQHEQVEHFFCYSEPRA----GDSADAEGLLSREKL--ADWLPQERDLDAYFLGPRPFMAQVKRHLADLGVPSQQCHYEFFGPAAALDA |
3OZV Chain:A ((1-398)) | MLTQKTKDIVKATAPVLAEHGYDIIKCFYQRMFEAHPELKNVFNMAHQEQGQQQQALARAVYAYAENIEDPNSLMAVLKNIANKHASLGVKPEQYPIVGEHLLAAIKEVLGNA-ATDDIISAWAQAYGNLADVLMGMESELYERSAEQPGGWKGWRTFVIREKRPESDVITSFILEPADGGPVVNFEPGQYTSVAIDVPALGLQQIRQYSLSDMPNGRSYRISVKREGGGPQPPGYVSNLLHDHVNVGDQVKLAAPYGSFHIDVDAKTPIVLISGGVGLTPMVSMLKVAL-QAPPRQVVFVHGARNSAVHAMRDRLREAAKTYENLDLFVFYDQPLPEDVQGRDYDYPGLVDVKQIEKSILLP---DADYYICGPIPFMRMQHDALKNLGIHEARIHYEVFGP------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -223939 for 2972 contacts (-75.3/contact) +
2D Compatibility (PS) -41414 + (NN) -21232 + (LL) 1064
1D Compatibility (HY) -36800 + (ID) 8750
Total energy: -331071.0 ( -111.40 by residue)
QMean score : 0.519
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