Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSKNTICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRV-MGIPCLGLNGG------P---AFRHSEAFSFQVATDDQAETDRLWNAIVDNGGE----------ESACGWCRDKWGISWQITPRVLSEAIASPDRAAARRAFEAMMTMGRIDIATIEKAFKG
2A4X Chain:A ((10-129))
--------VVVE-DMAKSLEFYRK-LGVEIPAE-ADS---------AP--HTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPL-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2A4X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27533 for 639 contacts (-43.1/contact) +
2D Compatibility (PS) -11187 + (NN) -5034 + (LL) 3940
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -44264.0 ( -69.27 by residue)
QMean score : 0.304
(partial model without unconserved sides chains):
PDB file :
Tito_2A4X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A4X-query.scw
PDB file :
Tito_Scwrl_2A4X.pdb
: