Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRARGVNWIERSARILACASLALAPTLSLAASEEDPWESINRPIFTFNDTLDTYA--LKPLAQGYQKVT----PNFVQDGVHNFFNNLGDVKNLANNL--LQAKFHNAGVDTSRLLFNSTFGLAGLIDVATPMGLQRNDEDFGQTLGYWGVGSGPYVMLPFLGPSTLRDAPAKIPDIYVSPYHYMDDVRARNVMFGINTVDTRANLLK---SEKLISGDKYIFIRNAYLQNREFKVKDGEVEDDF------------------------------------------------------------------------------------------------------------------- |
| 1G4W Chain:R ((171-539)) | LLDIALKGLKRTLPQLE----------QMDGNSLRPLRSLMTNLQNLNKQLNDYVTTLTNIQVGVARFSQWEVERWVDASTHELTQAVKKIHVIAKELKNVTAELEKIPQTMSGPTLGLARFAVSSIPINQQTQVKLSDGMPVPVNTLTFDGKPVALAGS---------YPKNTPDALEAHMKMLLEKECSCLVVLTSEDQMQAKQLPPYFRGSYTFGEVHTNSQKVSSASQGEAIDQYNMQLSCGEKRYTIPVLHVKNWPDHQPLPSTDQLEYLADRVKNSNQNGAPGRSSSDKHLPMIHCLGGVGRTGTMAAALVLKDNPHSNLEQVRADFRDSRNNRMLEDASQFVQLKAMQAQLLM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29592 for 1458 contacts (-20.3/contact) +
2D Compatibility (PS) -22097 + (NN) -733 + (LL) 1120
1D Compatibility (HY) -3200 + (ID) 1200
Total energy: -55702.0 ( -38.20 by residue)
QMean score : 0.116
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