Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTAQEFRAGQVANINGAPWVIQKAEFNKSGRNAAVVKMKLKNLLTGAGTETVFKADDKLEPIILDRKEVTYSYFADPLYVFMDS-EFNQY--EIEKDDLEGV-LTFIEDGMTDICEAVFYNDKVISVELPTTIVRQIAYTEPAVRGDTSGKVMKTARLNNGAELQVSAFCEIGDSIEIDTRTGEYKSRVKA |
3CPF Chain:A ((6-126)) | PMQCSALRKNGFVVLKGRPCKIVEMSTSKT---HAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGDLGKEIEQKYDCGE--EILITVLS---------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CPF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39833 for 691 contacts (-57.6/contact) +
2D Compatibility (PS) -11734 + (NN) 3456 + (LL) 4668
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -47793.0 ( -69.16 by residue)
QMean score : 0.392
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