Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MTLSEPVRRCPRNGKRIAREPGDRPGTFRLIHPRWAGASVKRAVRACSSCVLLCHAHAN--PEGTHHVQQHPGARQLHHLPVEATEPGHRRRPARRAAGLFRRFLAHRRGTQRRPRYPAQLRLPLPLSREGTRMIKRIAQTAGFAGLLAALLLTLLQI----LWVTPLILEAETYEKSEPVAAQPHEHAPGVAAHVHDEEAWEPEDGWQRTLSTTG--GNLVVAVGFALMLAGL----------FTLRAPGQTWQGLLWGLAGYAVFCLAPSLGLPPELPGTAAADLVQRQYWWIATAAATAVGLALLVFGGNWPLKLV-------GAVLLALPHLFGAPQPEVHASLA-----PEALAQRFVVASLVSNALFWAALGLAAAWLFRRNRGGVDA---- |
| 2XTS Chain:A ((2-390)) | GTPDPLITEIQPWASEFGEAVDAHPYGLPIHFESHVKRQYVEWLTESPVSSINFTPIHALEGTITPQGCAFERHHSGAIELSKQDYRLMINGLVEKPLVFTFEDLLRFPRTTTTAFCECAANGGMEWGGAQLE-GCQYTQGMIHNMEYVGVPLSVLLAEAGVKPEGKWLYAEGADASSNGRSFPMEKVMDD---VMLAFFANGEALRKEHGYPARLVVPGWEGNMWVKWVRRLGIYDKAVESREETSKYTDLMPDGRARKWTWVMDAKSVITSPSPQVPIRHGKG----PLVISGLAWSGNGRITRVDVSL-DGGKNWTTARITGQALPKALTRFHLDIDWDGSEMLLQSRAVDETGYVQPTKDALRAIRGRNNVYHNNGI---QTWWVKAD-GEVENVEIA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XTS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139055 for 2722 contacts (-51.1/contact) +
2D Compatibility (PS) -35750 + (NN) 310 + (LL) 1060
1D Compatibility (HY) -1600 + (ID) 2700
Total energy: -177735.0 ( -65.30 by residue)
QMean score : 0.110
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