Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPLPIPSLLIAGIGCRRGCSAEHLRALLERTLGEHGRSLAELDALASIDGKRDEPGLRQLATLLERPVHFLAPAVLHDYEPRLLSPSAVALRETGCSSVAEAAALALAERLGGGRADLLGAKRSDD-RASIALARLLTERELP
3EEQ Chain:A ((204-329))
--WLKPLKISIGIGSKKDVKMEEIRDGIYKVLERLNLKRERIGIIASIRE-----EVKKIADEFNVRFRLVNEEEINNFMNPCLTPPSKT------KGVAEISALIAGG----RNSKLILRKIAISRNSTIAVATYE------
General information:
TITO was launched using:
RESULT:
Template:
3EEQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88791 for 936 contacts (-94.9/contact) +
2D Compatibility (PS) -12936 + (NN) -6386 + (LL) 764
1D Compatibility (HY) -6400 + (ID) 1150
Total energy: -114899.0 ( -122.76 by residue)
QMean score : 0.455
(partial model without unconserved sides chains):
PDB file :
Tito_3EEQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EEQ-query.scw
PDB file :
Tito_Scwrl_3EEQ.pdb
: