Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIPLIGQLYRNNNVVTSIHGRGLINRSVIAIMKAHRFARHRMADDAELSVHETFPILKAMSELKLGAASVDLGKMVAKFKAEGNGRSIEDFVKAELAEVVGKQNGDAREGTDVVLYGFGRIGRLLARILIEKTGGGDGLRLRAIVVRKGAENDLVKR---ASLLRRDSVHGPFDGTITIDEENNTLTANGNLIQVIYSNDPASIDYTQYGIKNALLVDNTGKWRDAEGLGQHLKCPGIDRVVLTAPGKGALKNIVHGINHTDIGADD-KIISAASCTTNAIVPVLKAVNDQYGIVNGHVETVHSYTNDQNLIDNFHKGSRRGRSAPLNMVITETGAATAAAKALPVLKGKLTGNAIRVPTPNVSMAILNLNLEKA-TTREEINEYLRQMAMHSD-----LQKQIDFVSSQEVVSTDFVGSRHAGVVDAEATICNDNRVVLYVWYDNEFGYSCQVVRVMEDMAGVNPPAFPR |
| 2EP7 Chain:B ((9-330)) | --------------------------------------------------------------------------------------------------------------------GFGRIGRSFFR----ASWGREEIEIVAI-------NDLTDAKHLAHLLKYDSVHGIFKGSV--EAKDDSIVVDGKEIKVFAQKDPSQIPWGDLGVD--VVIEATGVFRDRENASKHLQG-GAKKVIITAPAKNPDITVVLGVNEEKYNPKEHNIISNASCTTNCLAPCVKVLNEAFGVEKGYMVTVHAYTNDQRLLDLPHKDFRRARAAAINIVPTTTGAAKAIGEVIPELKGKLDGTARRVPVPDGSLIDLTVVVNKAPSSVEEVNEKFREAAQKYRESGKVYLKEILQYCEDPIVSTDIVGNPHSAIFDAPLTQVIDNLVHIAAWYDNEWGYSCRL----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EP7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132988 for 2606 contacts (-51.0/contact) +
2D Compatibility (PS) -33455 + (NN) -10527 + (LL) 11200
1D Compatibility (HY) -21200 + (ID) 6550
Total energy: -193520.0 ( -74.26 by residue)
QMean score : 0.481
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