Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQGSLMLDIGGTWLTAEDRQILRHPEVGGLIIFARNIEHPAQVRELCAAIRAI-RPDLLLAVDQEGGRVQRLRQGFVRLPAMRAIADNPNAEE---LAEHCGWLMATEVQAVGLDLSFAPVLDLDHQRSAVVGSRAFEGDPERAALLAGAFIRGMHAAGMAATGKHFPGHGWAEADSHVAIPEDARSLEEIRRSDLVPFARL--AGQLDALMPAHVIYPQVDPQPAGFSRRWLQEILRGELKFDGVIFSDDLSMAGAHVVGDAASRIEAALAAGCDMGLVCNDRASAELALAALQRLKVTPPSRLQRMRGKG-YANTDYRQQPRWLEALSALRAAQLID |
| 4GVH Chain:B ((2-327)) | --GPVMLNVEGCELDAEEREILAHPLVGGLILFTRNYHDPEQLRELVRQIRAASRNHLVVAVDQEGGRVQRFREGFTRLPAAQSFFALHGLEEGGRLAQEAGWLMASEMIAMDIDISFAPVLDVGHI-SAAIGERSYHADPAKALAMATRFIDGMHDAGMKTTGKHFPGHGAVT-----ETPCDPRPETDIRGKDMSVFRTLISENKLDAIMPAHVIYRAIDPRPASGSPYWLKTVLRQELGFDGVIFSDDLS--------SYAERAQASLDAGCDMILVCNNRKG---AVSVLDNLSPIKAERVTRLYHKGSFSRRELMDSARWKTASAQL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192022 for 2798 contacts (-68.6/contact) +
2D Compatibility (PS) -33747 + (NN) -22010 + (LL) 2520
1D Compatibility (HY) -26400 + (ID) 7900
Total energy: -279559.0 ( -99.91 by residue)
QMean score : 0.536
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