Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRLFCSLLLALLCVSAHASFSASVDRARLTEGESVELTLESDDPTLFGKPDLSPLDALFEVLGTRQVNRLATQNGRAQATTRWIVTLLPKQSGYVAIPPISLGASSTQPIRLHVLEARDRAKSSKLAPVFIDASVDQETVYVQAQAILTLRIYHSVSLYDDSSLTPLAMNDAKVEQLGEARTYEKEINGIRHGVIEVRYAIFPQK-----SGTLEI--PAQAFSATLVDRGSDDYNPFGPRPGRQMR-------VTSPSIPLQVRPKPADYPADAPWMPARALSISESWSPQPEQAQVGESLTRNVLLKVEGLSGTQLPPLPLPDVQGLRRYPDQPQLADQSTDQGLIGSREEREALVPEQAGRIELPALEVVWWNTR---EDRLERTSLPPRTLEVAAAPQAEAEPPAAALPLGERLEPTLWPWQLATAVLALTTLLGFGLWWRARQLPAVIRAAANGPSSRSLLDELRRACLANDPQATRQALDAWARQQPDTLADMAARFVPLSDALDGLNGALYSESGHSWQGEDLWRAIRALPTTEQAPAGAVDNGGLPPLYPR |
| 4HNE Chain:A ((2-384)) | ---------------------------------------------------------------------------------------------------------------------------------------------------PLGSPEFAAQAQALAAQAAAAAHAAQAHRERNEFPEDPEFEAVVRQAELAIERCIFPERIYQGSSGSYFVKDPQGRIIAVFKPKNEEPYGHLNPKWTKWLQKFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRTKVVYLASETFNYSAIDRVKSRGKRLALR---FNRIGLPPKVGSFQLFVEGYKDADYWLRRFEAEPL---PENTNRQLLLQFER--LVVLDYIIRNTDRGNDNWLIKYDCPP-VIKVAAIDNGLAFPLKH--PDSWRAYPFYWAW-LPQAKVPFS-----------QEIKDLILPKISDPNFVKDLEEDLYELFKKDPGFDRGQFHKQ-------IAVMRGQILNLTQALKDNKSPLHLVQMPPVIVET------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HNE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 32458 for 2475 contacts (13.1/contact) +
2D Compatibility (PS) -35423 + (NN) -7090 + (LL) 14748
1D Compatibility (HY) -9200 + (ID) 3050
Total energy: -7557.0 ( -3.05 by residue)
QMean score : 0.205
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