Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSISISYSTTYSGWTVADYLADWSAYFGDVNHRPGQVVDGSNTGGFNPGPFDGSQYALKSTASDAAFIAGGDLHYTLFSNPSHTLWGKLDSIALGDTLTGGASSGGYALDSQEVSFSNLGLDSPIAQGRDGTVHKVVYGLMSGDSSALQGQIDALLKAVDPSLSINSTFDQLAAAGVAHATPAAAAAEVGVVGVQELPHDLALAA
3W8O Chain:B ((3-186))
MSISISYSTTYSGWTVADYLADWSAYFGDVNHRPGQVVDGSNTGGFNPGPFDGSQYALKSTASDAAFIAGGDLHYTLFSNPSHTLWGKLDSIALGDTLTGGASSGGYALDSQEVSFSNLGLDSPIAQGRDGTVHKVVYGLMSGDSSALQGQIDALLKAVDPSLSINSTFDQLAAAGVAHATPAA---------------------
General information:
TITO was launched using:
RESULT:
Template:
3W8O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114328 for 1507 contacts (-75.9/contact) +
2D Compatibility (PS) -20157 + (NN) -14144 + (LL) 1972
1D Compatibility (HY) -21600 + (ID) 9200
Total energy: -177457.0 ( -117.76 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_3W8O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W8O-query.scw
PDB file :
Tito_Scwrl_3W8O.pdb
: