Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSSRSVNPRPSFAPRALSLAIALLLGAPAFAANSGEAPKNFGLDVKITGESENDRDLGTAPGGTLNDIGIDLRPWAFG--QWGDWSAYFMGQAVAATDTIETDTLQSDTDDGNNSRNDGREPDKSYLAAREFWVDYAGLTAYPGEHLRFGRQRLRED-----SGQWQDTNIEALNWSFET-TLLNAHAGVAQRFSEYRTDLD-ELAP------EDKDRTHVFGDISTQWA-PHHRIGVRIHHADDSGHLRRPGEEVDNLDKTYTGQLTWLGIEATGDAYNYRSSMPLNYWASATWLTGDRDNLTTTTVDDRRIATGKQSGDVNAFGVDLGLRWNIDEQWKAGVGYARGSGGGKDGEEQFQQTGLESNR--SNFTGTRSRVHRFGEAFRGELSNLQAATLFGSWQLRE----DYDASLVYHKFWRVDDDSDIGTSGINAALQPGEKDIGQELDLVVTKYFKQGLLPASMSQYVDEPSALIRFRGGLFKPGDAYGPGTDSTMHRAFVDFIWRF |
| 2Y2X Chain:A ((9-387)) | ---------------------------------------AKTDLVLRNYYFNRDF---------LVDEWAQGFILKFSSGYTPGTVGVGLDAIGLFGVKLNS----NSELL----PLHDDGRAADNYGRVGVA-AKLRV----SASELKIGEMLPDIPLLRYDDGRLLPQTFRGFAVVSRELPGLALQAGRFDAVSLRNSADMQDLSAWSAPTQKSDGFN--YAGAEYRFNRERTQLGLWHGQLEDVY------------------RQSYANLLHKQRVG----DWTLGANLGLFVDRDDGAAR-------------AGEIDSHTVYGLFSAGI--G-LHTFYLGLQKVGGDS-----GWQ--SVYGSSGRSMGND------MF--NGNFTNADERSWQVRYDYDFVGLGWPGLIGMVRYGHGSNATTK-------------AGSGGKEWERDVELGYTVQSGPL----------ARLNVRLNHASNRRS----FNSDFDQTRLVVSYP--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y2X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 72693 for 2657 contacts (27.4/contact) +
2D Compatibility (PS) -35296 + (NN) -2544 + (LL) 5956
1D Compatibility (HY) -400 + (ID) 1650
Total energy: 38759.0 ( 14.59 by residue)
QMean score : 0.057
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