Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKYIALPAVSLLALALAACSTPPNANLEQARSNFSALQSQPDATKVAALETKDAGDWLAKADKAYQDGEDQRDVDQLAYLTNQRIELAKQTIVLRNAEAQLQNASAQRAQARLDARTAQLDKLRSQLNAKQTSRGTMVTFGDVLFDLDKSDLKPGAMRNIQQLAEFLQQNPERQVIVEGYTDSTGSANYNQRLSERRADSVRMALLSR-GISPERVATRGYGKEYPVASNGTSSGRAMNRRVEVTISNDAKPVAPRSSVSG |
| 4G88 Chain:G ((16-120)) | -----------------------------------------------------------------------------------------------------------------------------------------------VFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAMNRRVFATIT-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22992 for 755 contacts (-30.5/contact) +
2D Compatibility (PS) -11929 + (NN) -9821 + (LL) 11372
1D Compatibility (HY) -4400 + (ID) 2200
Total energy: -39970.0 ( -52.94 by residue)
QMean score : 0.597
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