Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKAYDIEIVNDAAHAGEANHGWCFGLPPGIRPEQWPLDPDTGYPLMHGFTLLLPEDYRVHGPEIVALSFFSLAPDQNDGGPTSVDGIRE-----MLIDPPAQPPAEAELRPFWEAGRNSHPRLHRMEDILGGAYALILLDAAEFSGAPCQPRALPAGNPLLAQTEPPQWLEAGSAASFVPDWAEDDYYLLRALGGRPAAGHQQRYPLRWTARAQDPNAGVVPSEYGDGGYQLPHYWLDGKIERDNYREHPWVEGHLPNHIGGTMRPVQGVPEMSPFYVEFEEYLGGYNFGGGNAQLDFRDMRFDWACG |
2AKK Chain:A ((1-74)) | --------------------------------MSIEVRDCNGALLADGDNVSLIKDLKLKGSSTVLKRGTMIRGIRLTDSEDEIEGRTDKIKGLVLRTEFLKKAGS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AKK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -356 for 437 contacts (-0.8/contact) +
2D Compatibility (PS) -7520 + (NN) -9361 + (LL) 10400
1D Compatibility (HY) -800 + (ID) 450
Total energy: -8087.0 ( -18.51 by residue)
QMean score : 0.081
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