Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPAETPPLRPDADPPQCALPEARPDRDASTKLRAAVLGANDGLVSNLCLVMGVAGASMAHSSIVLTGMAGLVSGACSMALGEWLSVTNAREMASKRIAEEERLLRLCPNTETQELIDIFTAKGLSEVSARRVALQLMNDGRGALDTLSREALGIDPTELGGNPWNAAGTSFLLFSLGALVPVAPFLFLDGAAALVASLLSSLLALLFSGAVTARFTGRPLAFSALRQVLVGTLAAAFTYGLGTALGVGLG
4DHX Chain:A ((1162-1233))
-------------------------------------------------------------LVLSELSQGLAVELMERVMMEFVRETCSQELKNAVETDQRVRVARCCEDVCAHLVDLFLVEEIFQTAKETLQ---------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4DHX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 341 for 278 contacts (1.2/contact) +
2D Compatibility (PS) -7630 + (NN) -1162 + (LL) 10316
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -1385.0 ( -4.98 by residue)
QMean score : 0.088
(partial model without unconserved sides chains):
PDB file :
Tito_4DHX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DHX-query.scw
PDB file :
Tito_Scwrl_4DHX.pdb
: