Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHRSPLAWLRLLLAAVLGAFLLGGPLHAAETAATRSPAWAQAVDPSINLYRMSPTLYRSALPNAQSVALLQRLQVKTVVSFIKDDDRAWLGQAPVRVLSLPTHADRVDDAEVLSVLRQLQAAEREGPVLMHCKHGNNRTGLFAAMYRIVVQGWDKQAALEEMQHGGFGDEDDMRDASAYVRGADVDGLRLAMANGECSPSRFAVCHVREWMAQALDRP
4R0T Chain:A ((34-198))
---------------------------------TRSPAWAQAVDPSINLYRMSPTLYRSALPNAQSVALLQRLQVKTVVSFIKDDDRAWLGQAPVRVLSLPTHADRVDDAEVLSVLRQLQAAEREGPVLMHSKHGNNRTGLFAAMYRIVVQGWDKQAALEEMQHGGFGDEDDMRDASAYVRGADVDGLRLAMANGECS--------------------
General information:
TITO was launched using:
RESULT:
Template:
4R0T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99233 for 1330 contacts (-74.6/contact) +
2D Compatibility (PS) -18527 + (NN) -14897 + (LL) 4772
1D Compatibility (HY) -20400 + (ID) 8200
Total energy: -156485.0 ( -117.66 by residue)
QMean score : 0.682
(partial model without unconserved sides chains):
PDB file :
Tito_4R0T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4R0T-query.scw
PDB file :
Tito_Scwrl_4R0T.pdb
: