Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNAMQVLRTWAARGVQWVGVAGVIGLSGAAQAGDYDGSPQVAEFVSEMTRDYGFAGEQLMGLFRDVNRKQSILDAISRPAERVKQWKEYRPIFISDARISRGVDFWNKHAEDLARAEKEYGVPAEIIVSIIGVETFFGRNTGSYRVMDALSTLGFDYPPRADFFRKELREFLLLAREQQVDPLSLTGSYAGAMGLPQFMPSSFRAYAVDFDGDGHINIWSDPTDAIGSVASYFKQHGWVTGEPVVSVAEINDESAESAVTRGVDPTMSLGELRARGWRTHDALRDDQKVTAMRFVGDKGIEYWVGLPNFYVITRYNRSAMYAMAVYQLAGEIARARGAH |
| 3GXR Chain:A ((20-125)) | -----------------------------------------------------------------------------------RQDKLEYDGVRASHTMAQTDAGRMEKYKSFINNVAKKHVVDPAVIAAIISRESRAGNVIFNTTP-------------------------------------PGWGDNYNGFGLMQVDKRYHEPR----------GAW-NSEEHIDQATGILVNF------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GXR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35002 for 752 contacts (-46.5/contact) +
2D Compatibility (PS) -11185 + (NN) -1561 + (LL) 15892
1D Compatibility (HY) 2000 + (ID) 850
Total energy: -30706.0 ( -40.83 by residue)
QMean score : 0.248
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