Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIAAYQARCQARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALELRDLALAALDGFPPSADPLRQLARYIVERRN
3ZMB Chain:B ((2-292))
MIAAYQARCQARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVE------------------PTYPALLGLEAAKGYALELRDLALAALDGFPPSADPLRQLARYIV----
General information:
TITO was launched using:
RESULT:
Template:
3ZMB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148519 for 2329 contacts (-63.8/contact) +
2D Compatibility (PS) -31024 + (NN) -32827 + (LL) 716
1D Compatibility (HY) -34800 + (ID) 13650
Total energy: -260104.0 ( -111.68 by residue)
QMean score : 0.579
(partial model without unconserved sides chains):
PDB file :
Tito_3ZMB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZMB-query.scw
PDB file :
Tito_Scwrl_3ZMB.pdb
: