Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLLVLFCCLWLLPGVASAAPSVGEIRVVS-ETWTRYTQED----GRGVAWDLLRAVYEPAGVRLRIANEPYTRAVGLVLRGEADAWVGAYRGEIDE--ALYPRWPYDVDPIAVLSLKDNP-PPPLEGLSRFRLSWMRGYAFARYFPT---LTPHSELQRRTSALPMLLNHRVDYFIDSRPELEEMLAGAGALAAEYRI--TDVTRLPLYLGFSDSPRGRELLALFDRRMRQLHASGELERIFARWNWPYAPLKAILPPKE
3H7M Chain:A ((7-231))
-------------------RDRHRTIVVGGDRDYPPYEFIDQNGKPAGYNVELTRAIAEVMGMTVEFRLGAWSEMFSALKSGRVDVLQGISWSEKRARQIDFTP-PHTIVYHAIFARRDSPPAAGLEDLRGRKVALHRDGIMHEYLAERGYGKDLVLTPTPADALRLLAAGGCDYAVVAMVPGMYIIRENR--LTNLVPVARSIAAQRYGYAVRQG--DAELLARFSEGLAILRKTGQYEAIRAKWLGV------------
General information:
TITO was launched using:
RESULT:
Template:
3H7M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130546 for 1745 contacts (-74.8/contact) +
2D Compatibility (PS) -23328 + (NN) -13966 + (LL) 3280
1D Compatibility (HY) -8000 + (ID) 1950
Total energy: -174510.0 ( -100.01 by residue)
QMean score : 0.375
(partial model without unconserved sides chains):
PDB file :
Tito_3H7M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H7M-query.scw
PDB file :
Tito_Scwrl_3H7M.pdb
: