Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVFQHDIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDI------TDSQRLQRLFEALPR--------LDVLVNNAGISR--DREEYDLATFERVLRLNLSAAMLASQ-LARPLLAQ-RGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGAVLAVDGGYLCA
4HP8 Chain:B ((9-246))
---------GRKALVTGANTGLGQAIAVGLAAAGAEVV--------CAARRAPD---ETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADYVHGAILNVDGGWLA-
General information:
TITO was launched using:
RESULT:
Template:
4HP8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97901 for 1847 contacts (-53.0/contact) +
2D Compatibility (PS) -24250 + (NN) -10987 + (LL) 1752
1D Compatibility (HY) -18800 + (ID) 4950
Total energy: -155136.0 ( -83.99 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_4HP8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HP8-query.scw
PDB file :
Tito_Scwrl_4HP8.pdb
: