Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQLKDKVIIITGGCQGLGRAMGEYLAGKGARLALVDLNRERLDEAVAACKAAGGDARAYV-CNVADEEQVTHMVAQVASDFGAINGLVNNAGILRDGLTIKVKDGQLSKMSLAQWQSVIDVNLTGVFLCTREVAAKMIELKNEGAIVNISSIS-RAGNMGQANYSAAKAGVAADTVVWAKELARYGIRVAGVAPGFIETEMTAGMKPEALEKMTAGIPLKRMGKPVEIAHSVAYIF----ENDYYTGRVLELDGGLRL |
| 4NBU Chain:C ((10-250)) | -RLQDKVAIITGAANGIGLEAARVFMKEGAKVVIADFNEAAGKEAVEANPGV-----VFIRVDVSDRESVHRLVENVAERFGKIDILINNAGITRDSM--------LSKMTVDQFQQVINVNLTGVFHCTQAVLPYMAE-QGKGKIINTSSVTGTYGNVGQTNYAAAKAGVIGMTKTWAKELARKGINVNAVAPGFTETAMVAEVPEKVIEKMKAQVPMGRLGKPEDIAN--AYLFLASHESDYVNGHVLHVDGGIMM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NBU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137199 for 2027 contacts (-67.7/contact) +
2D Compatibility (PS) -25698 + (NN) -8910 + (LL) 820
1D Compatibility (HY) -21200 + (ID) 5800
Total energy: -197987.0 ( -97.67 by residue)
QMean score : 0.569
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