Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTLLRRGLLVFLAAFPLLSMAAPTPQQVVQGTVDELLSDIKANKAAYKADPQKLYATLDRILGPVVDAEGIAKSVMTVKYSRQASPEQIKRFEEVFKNSLMQFYGNALLEYDNQDIRVLPSSAKPSDDRASVNMEIRDSKGTVYPVSYTMTNLAGGWKVRNVIINGINIGKLFRDQFADTMQKNRNDLEKTIAGWGEVVAKAKETAKAEEAGAK |
1KHD Chain:A ((25-87)) | ------------------------------------------------SMTQEESHQLFAAIVRGELEDSQLAAALISMK-MRGERPEEIAGAASALLADAQP---------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KHD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1211 for 326 contacts (-3.7/contact) +
2D Compatibility (PS) -5692 + (NN) -2992 + (LL) 11124
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -321.0 ( -0.98 by residue)
QMean score : 0.509
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