Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSELNLTTDEARVSYGIGRQLGDQLRENPVPGMTLDAVLAGLSDAFAGIDSRVSGEALSASFQVIRERMQAEAQAKAEAAAGEGRAYLAENAKREGVTVLPSGLQFEVLSTGEGAKPSREDTVRTHYHGTLIDGTVFDSSYQRGQPAEFPVGG--VIAGWVEALQLMNAGSKWRLHVPSELAYGGQAVGS-IPPHSVLVFDVELLEIL
4GGQ Chain:B ((99-209))------------------------------------------------------------------------------------------------VVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV-


General information:
TITO was launched using:
RESULT:

Template: 4GGQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60983 for 817 contacts (-74.6/contact) +
2D Compatibility (PS) -11445 + (NN) -668 + (LL) 6760
1D Compatibility (HY) -6400 + (ID) 2550
Total energy: -75286.0 ( -92.15 by residue)
QMean score : 0.522

(partial model without unconserved sides chains):
PDB file : Tito_4GGQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GGQ-query.scw
PDB file : Tito_Scwrl_4GGQ.pdb: