Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSELNLTTDEARVSYGIGRQLGDQLRENPVPGMTLDAVLAGLSDAFAGIDSRVSGEALSASFQVIRERMQAEAQAKAEAAAGEGRAYLAENAKREGVTVLPSGLQFEVLSTGEGAKPSREDTVRTHYHGTLIDGTVFDSSYQRGQPAEFPVGG--VIAGWVEALQLMNAGSKWRLHVPSELAYGGQAVGS-IPPHSVLVFDVELLEIL |
4GGQ Chain:B ((99-209)) | ------------------------------------------------------------------------------------------------VVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GGQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60983 for 817 contacts (-74.6/contact) +
2D Compatibility (PS) -11445 + (NN) -668 + (LL) 6760
1D Compatibility (HY) -6400 + (ID) 2550
Total energy: -75286.0 ( -92.15 by residue)
QMean score : 0.522
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