Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTMRGWILAGLLLAALAAQAGEVHGVEVEARLRDYFFDAARRGDQAMLKEFVEAGFDLDVQDAKGYTALILAAYHGHGGAVEQLLEAGADPCVQDARGNTALMGAIFKGEVRIARRLIGAQCSPDQRNGAGQTAAMYAALFKREELLQALSARGADLGARDALGNSVESLRRGELNGTAAAR
4YDY Chain:B ((18-148))
------------------------------------LLEAARAGQDDEVRILMANGADVNALDDSGYTPLHLAAEDGHLEIVEVLLKHGADVNAADRLGDTPLHLAAFVGHLEIVEVLLKAGADVNAVDLAGVTPLHVAAFYGHLEIVEVLLKAGADVNAQDKFGKT----------------
General information:
TITO was launched using:
RESULT:
Template:
4YDY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64068 for 1125 contacts (-56.9/contact) +
2D Compatibility (PS) -15176 + (NN) -15815 + (LL) 4708
1D Compatibility (HY) -6000 + (ID) 2300
Total energy: -98651.0 ( -87.69 by residue)
QMean score : 0.749
(partial model without unconserved sides chains):
PDB file :
Tito_4YDY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4YDY-query.scw
PDB file :
Tito_Scwrl_4YDY.pdb
: