Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----MSRRLPFLLRCALFCGAGLLAATAQARMESLDDDQLSDVVGQAFINLTTDAANGLNFTRINFGADIETQLNMKKLQLGQYNRSGELAGSADIAIDNFALGTVNDTTGAINPFLIS----NPYIEFAYDG------SKMVGIRIGFGEAKGYLSGDIKTLTGNVPVDLYGTGSQLGGSISCGLLALDCLAAKTAITLTGSSQYTAQAELVNSSGNPDPIRAAMIGLKNGTALDMHDSTIIGSLVNVLLPFLTSNDCKLMGAQTCFNLAQYQSFPIGTVDPNNAQNFIDSSKGFFISMQSQNVQWRDQQDPSKLVAALAGAFLNMSR--NADGTAPIKVDFGQAFNGIPRQDTCLGGLNKGC |
2Q0D Chain:A ((23-353)) | PSPAVVGRSLVNSFKQFVS-HVDATYRLVLDCVAAVDPLMRLYTFGSTVVYGVHEKGSDVDFVVLNKTDVEDGKGGDAATQVAKGLQADILAKLARVIRQKHLSWNVEEVRRTRVPVVRVKGGGAVDFDITAYRRNGVRNSALLRAYFEQNPPCRWLSMSIKRWSKQTGLNASVIGGSIT-SYGFNLMVVYYLLQRNHLQFVPPSTIDVSRVEPLPPHLPLEEPA-------------DEGLELGTQVLDFLHFFLHE----------------FDSDKQVISLNRPGITTKEELDWTKSAEDFARMNGEKVHYQWCIEDPYELNLNVGRNVTPLKRDFLRRHLEKARDTALLTIV--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q0D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51408 for 2370 contacts (-21.7/contact) +
2D Compatibility (PS) -31314 + (NN) 787 + (LL) 1904
1D Compatibility (HY) -2400 + (ID) 1700
Total energy: -84131.0 ( -35.50 by residue)
QMean score : 0.125
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