Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLEKLFQLKAHNTTVRTEILAGITTFLTMAYILFVNPSILGETGMDKGAVFVATCLAAAIGSTIMGLIANYPIALAPGMGLNAFFTYTVVLHMGHSWQVALGAVFISATMFFLLSIFRIREWIINSIPLPLRSAIAAGIGLFLALIALQNAGIVVDNPATLIGMGDLTKPAPILATLGFILIVALEARSVTGAVLIGILVVTAIAILLGVTQFGGVVSMPPSLAPTFLQLDIKGALDIGLVSVI------FAFLFVDLFDNSGTLIGVAKRAGLMGKD-GHMPKMGRALIADSTAAMGGSLLGTSTTTSYIESAAGVSAGGRTGLTAIVVAILFLLALFFAPLAGSVPAFATAPALLFVAVLMASGLAEIDWEDITVAAPVVVTALAMPFTYSIATGIAFGFISWTAIKVLSGRWRELNPALVILSVLFVIKLGFFNA |
| 3NSW Chain:A ((1-106)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSHMEYCPKMLSEIRQEDINDVETVAYVTVTGKTARSYNLQYWRLYDVPKTAPSQWPSFGTLRDDCGNIQ-----LTADTDYVLGCK---SGNQDCFVKLHDGLSQKEKDLLKE--------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3NSW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -40286 for 674 contacts (-59.8/contact) +
2D Compatibility (PS) -9950 + (NN) 2165 + (LL) 31240
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -22631.0 ( -33.58 by residue)
QMean score : 0.026
|
|
|