Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQRVYVALGSNLAEPREQIQAALDAFERLPETRLVAVSPLYISDPLGPADQPRFVNGVAALDTNLAPLDLLDALQAIELEQGRVRDL-RWGPRTLDLDILLFGEQLLDLPRLKVPHYHMQARAFVLYPLADLAPDLRLPDGRHLPELLAACPFEGIERLPGA
4F7V Chain:A ((4-157))
-----YIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNK----
General information:
TITO was launched using:
RESULT:
Template:
4F7V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101193 for 1166 contacts (-86.8/contact) +
2D Compatibility (PS) -16303 + (NN) -8982 + (LL) 832
1D Compatibility (HY) -16800 + (ID) 3950
Total energy: -146396.0 ( -125.55 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_4F7V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4F7V-query.scw
PDB file :
Tito_Scwrl_4F7V.pdb
: