Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKNKTFLAAALVALAASFPVHAATDYTRTRYPIVLSHGLFGF-KSVGPVDYWHAIVPALEKDGAKVFATSQSPVNSNEV---RGEQLLAQVEEVLALTGAEKVNLIGHSQGGMTVRYVAGVAPQLVASVTTMGTPHKGTPVADAVTGFSEFLGPIGTEVIASAVEALFSVV-DIVDGGEWVKGDALAALNSLNTPGTARFNQRFPQA---IPASACGQGA--ETVAGVRY--YSMSGTG---------------------SLTNALDPSSAGLAVTG-LLFGEA---NDGLVGQCSSHLGSVVKDNYRMDHLDEVNQLLGLVSLFESDPTQVYRQHANRLRNVGL |
| 1TAH Chain:D ((3-314)) | --------------------------YAATRYPVILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNGRGEQLLAYVKQVLAATGATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPHRGSEFADFV---QDVLKTDPTGLSSTVIAAFVNVFGTLVSSSHNTDQDALAALRTLTTAQTATYNRNFPSAGLGAPGS-CQTGAATETVGGSQHLLYSWGGTAIQPTSTVLGVTGATDTSTGTLDVANVTDPSTLALLATGAVMINRASGQNDGLVSRCSSLFGQVISTSYHWNHLDEINQLLGVRGANAEDPVAVIRTHVNRLK---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1TAH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -80314 for 2477 contacts (-32.4/contact) +
2D Compatibility (PS) -29057 + (NN) -7908 + (LL) 2680
1D Compatibility (HY) -21200 + (ID) 7000
Total energy: -142799.0 ( -57.65 by residue)
QMean score : 0.386
|
|
|