Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTTPHLMLEPAFHPGLDTAGSGRDAIGLGAATSGRLDARHGTILSLEDINVSFDGFKALRDLTLYIGVGELRCIIGPNGAGKTTLMDVITGKTRPQSGTAYFGDTLDLTRMSEVQIAQAGIGRKFQKPTVFEALSVFENLELAQ-RADKSVWASLRARLDGTQRERIEE----VLATIRLLESRQRPAGLLSHGQKQFLEIGMLLVQEPQLLLLDEPVAGMTDAETEFTAELFKSL----ARKHSLMVVEHDMGFVGSIADHVTVLHQGHVLAEG----SLAEVQADEQVIEVYLGR
1G9X Chain:B ((7-256))
-------------------------------------------ILRTENIVKYFGEFKALDGVSISVCKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYF-ENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEINPGESPLNSLFYKKWIPKEEEMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPG---LAHDIFNHVLELKAKGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEEEIKNVLSDPKVVEIYIG-
General information:
TITO was launched using:
RESULT:
Template:
1G9X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142331 for 1866 contacts (-76.3/contact) +
2D Compatibility (PS) -25342 + (NN) -12810 + (LL) 1672
1D Compatibility (HY) -23200 + (ID) 4050
Total energy: -206061.0 ( -110.43 by residue)
QMean score : 0.387
(partial model without unconserved sides chains):
PDB file :
Tito_1G9X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G9X-query.scw
PDB file :
Tito_Scwrl_1G9X.pdb
: