Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLIIPAIDLKDGACVRLRQGLMEDATVFSDDPVAMAAKWVDGGCRRLHLVDLNGAFEGKPVNGEVVTAIARRYPDLPIQIGGGIRSLETIEHYVRAGVSYVIIGTKAVKQPEFVGEACRAFPGKVIVGLDAKDGFVATDGWAEVSEVQVIDLARRFEADGVSAIVYTDISKDGMMQGCNVEATAALANATRIPVIASGGIHNLGDIQKLLDARTPGIIGAITGRAIYEGTLDVAEAQALCDNFKA
4X2R Chain:A ((5-235))
LTLLPAVDVADGKAVRLLQGEAGSETDYGS-PIEAARDWVEAGAEWIHLVDLDAAF-GRGSNAPLLERIVGEV-GIKVELSGGIRDDASLTRALKAGAARVNLGTAALEDPQWTARVIAEHGEKIAVGLDVRGTTLAAR-----GGDLWQTLDRLNEA-GCRRYVVTDVTKDGTLTGPNTELLRQVAARTSAPVVASGGISSLEDIAALARLVPQGVDSAIVGKALYNGNFTLPQ----------
General information:
TITO was launched using:
RESULT:
Template:
4X2R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -166546 for 1978 contacts (-84.2/contact) +
2D Compatibility (PS) -24608 + (NN) -11572 + (LL) 1060
1D Compatibility (HY) -12000 + (ID) 3850
Total energy: -217516.0 ( -109.97 by residue)
QMean score : 0.685
(partial model without unconserved sides chains):
PDB file :
Tito_4X2R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4X2R-query.scw
PDB file :
Tito_Scwrl_4X2R.pdb
: