Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNRILLLGANGQVGWELQRALAPLG-ELLVCDRRRADLADPEGLARLVRAERPQFIVNAGAYTAVDKAESDADNARLINARAVAVLAEEAAACGAWLVHYSTDYVFDGAGSVPFAEDAPTGPLSVYGQTKLEGEQAIRASGCRHLIFRTSWVYAARGGNFAKTMLRLAGQRDELKVVADQFGAPTSAELIADVTAQALQRLCWDVELAARASGTYHLVASGETSWHLYARFVIEQALERGWELQATPQRVLPIATEDYPVPAKRPANSRLDNRKLQQVFGLVLPDWRYHAGRMIQELSEQGPL |
1VL0 Chain:B ((14-280)) | --KILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKYYIVRTAWLY-GDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDE---------KNYGTFHCTCKGICSWYDFAVEI--------FRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITREWK---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VL0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125798 for 2320 contacts (-54.2/contact) +
2D Compatibility (PS) -29278 + (NN) -14257 + (LL) 3204
1D Compatibility (HY) -14400 + (ID) 5250
Total energy: -185779.0 ( -80.08 by residue)
QMean score : 0.595
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