Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATAPRPLREQYLHFQPISTRWHDNDIYGHVNNVTYYAFFDTAVNTYLIERGGLDIQGGEVIGLVVSSSCDYFAPVAFPQRIEMGLRVARLGNSSVQYELALFLEGQREACAAGRFVHVFVERRSSRPVAIPQELRDALAALQSSAQ
2O6T Chain:E ((7-146))
----PRPLREQYLHFQPISTRWHDNDIYGHVNNVTYYAFFDTAVNTYLIERGGLDIQGGEVIGLVVSSSCDYFAPVAFPQRIEMGLRVARLGNSSVQYELALFLEGQREACAAGRFVHVFVERRSSRPVAIPQELRDALAALQS---
General information:
TITO was launched using:
RESULT:
Template:
2O6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98634 for 1051 contacts (-93.8/contact) +
2D Compatibility (PS) -15031 + (NN) -4602 + (LL) 784
1D Compatibility (HY) -20800 + (ID) 7000
Total energy: -145283.0 ( -138.23 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_2O6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O6T-query.scw
PDB file :
Tito_Scwrl_2O6T.pdb
: