Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGWRLLLTRPDEECAALAASLGEAGVHSSSLPLLAIDPLEETPEQRTLMLDLDRYCAVVVVSKPAARLGLERLDRY--WPQPPQQTWCSVGAATAAILEAYGL-DVTYPEQGDDSEALLALPAFQDSLRVHDPKVLIMRGEGGREFLAERLRGQGVQVDYLPLYRRRAPDYPAGELLARVRAERLNGLVVSSGQGLQNLYQLAAADWPEIGRLPLFVPSPRVAEMARELGAQRVIDCRGASAPALLAALTSAA
3P9Z Chain:A ((16-224))
--------------------------APYKTLILNEFCYYPLEL-------DPTPFNALIFTSKNAVFSLLETLKNSPKLKMLQNIPAYALSEPTAKTLQDHHFKVAFMGE----------EIFPL----LEKKSVLYLRAKEIVSSLDTILLEHGIDFKQAVVYENKLKHLTLS-EQNALKPKEKSILIFTAISHAKAFLHYFEF----LENYTAISIGNTTALYLQEQGIPS-YIAKKPSLEACLELALSL-
General information:
TITO was launched using:
RESULT:
Template:
3P9Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109456 for 1414 contacts (-77.4/contact) +
2D Compatibility (PS) -21286 + (NN) -8249 + (LL) 3900
1D Compatibility (HY) -6400 + (ID) 1450
Total energy: -142941.0 ( -101.09 by residue)
QMean score : 0.462
(partial model without unconserved sides chains):
PDB file :
Tito_3P9Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P9Z-query.scw
PDB file :
Tito_Scwrl_3P9Z.pdb
: