Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEKSQEPTAALDAEQVAAYLSQHPEFFVEHDELIPELRIPHQPGDAVSLVERQVRLLRERNIEMRHRLSQLMDVARENDRLFDKTRRLVLDLLDATSLEDVVSTVEDSLRHEFQVPYVSLILFSDSSVS-VGR--SVSSAEA---------HQAIGGLLSGGKTVCGV-LRPHELAFLFGESDRDEIGSAAVVSLSF-QGLHGVLAIGSPDP-QHYKSSLGTLFLGYVAEVLARVLPRFSSPLRSVR
2W3G Chain:A ((4-150))
-----------------------------------------------------------------------------------------------DPDLEATLRAIVHSATSLVDARYGAMEVHDRQHRVLHFVYEGIDEETVRRIGHLPKGLGVIGLLIEDPKPLRLDDVSAHPASIGFPPYH-PPMRTFLGVPVRVRDESFGTLYLTDKTNGQPFSDD-DEVLVQALAAAAGIAVANARLYQ----
General information:
TITO was launched using:
RESULT:
Template:
2W3G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105299 for 967 contacts (-108.9/contact) +
2D Compatibility (PS) -14006 + (NN) -7011 + (LL) 8852
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -120614.0 ( -124.73 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_2W3G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W3G-query.scw
PDB file :
Tito_Scwrl_2W3G.pdb
: