Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTFAKGILAALALAAAVGQASATELEHWPAPAARQLNALIEANANKGAYAVFDMDNTSYRYDLEESLLPYLEMKGVLTRDRLDPSLKLIPFKDQAGHKESLFSYYYRLCEIDDMVCYPWVAQVFSGFTLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPENVIGVTTLLKNRKTGELTTARKQIAEGKYDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHLWVNRKAKYMEQINGMIKQHSAAQAKAGLPVTADRNWVIVTPEQIQ |
| 3KD3 Chain:A ((82-182)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFAD----YLNIPRENIFAVETIWNS--------------DGSFKEL-------D----NSNGACDSKLSAFDKAKGLIDGEVIAIGDG-YTDYQLYEK------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KD3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36035 for 632 contacts (-57.0/contact) +
2D Compatibility (PS) -11068 + (NN) -5834 + (LL) 17792
1D Compatibility (HY) -5600 + (ID) 1000
Total energy: -41745.0 ( -66.05 by residue)
QMean score : 0.351
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