Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINKDSLTHHISQQFNAELEDVRSHLLAMGGLVEKQVNDAVNALIDADSGLAQQVREIDDQINQMERNIDEECVRILARRQPAASDLRLIISISKSVIDLERIGDEASKVARRAIQLCEEGESPRGYVEVRHIGSQVQKMVQEALDAFARFDADLALSVAQYDKTVDREYKTALRELVTYMMEDPRAISRVLNIIWALRSLERIGDHARNIAELVIYLVRGTDVRHIGLTRMKEEVENNRGE
1XWM Chain:A ((4-215))
-------------TFADDLASLHNKLIEMGRLTEVALQQAIEAFQTQNANLAMAVIDGDGSIDALEEEVNDFALWLIAAQQPVATDLRRIVAAIKIASDIERIADFAVNIAKACIRIGGQPFV-MDIGPLVLMYRLATDMVSTAIAAYDREDASLAAQIADMDHRVDEQYGEMMASLLAVAKTDAATLAQMNVLALVARYIERTADHATNIAEHLVYLVKGKHYDF----------------
General information:
TITO was launched using:
RESULT:
Template:
1XWM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75168 for 1691 contacts (-44.5/contact) +
2D Compatibility (PS) -22980 + (NN) -10631 + (LL) 1772
1D Compatibility (HY) -13600 + (ID) 3100
Total energy: -123707.0 ( -73.16 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_1XWM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XWM-query.scw
PDB file :
Tito_Scwrl_1XWM.pdb
: