Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRMRFSGISGCLSAAVLALGVGGAPVVQADALGDSLEQAHIRKATFAAP-AWEGYTNAD---GSGLYWDLLKQVYAPYGLDVKFINMPWNRANKLMTAGS--M--VDGVPGEIPGVE-GKLYAQLPIDIEYHGVMHAAKTP-FSGRASLTGKRVGWRHSYNLIPAEQR---DFTLVECVRPERCTEQVQNGELDFFLDEPDELEKQRSEAHLPADAYPI--AQLPPGKESFMTFADSASGRLLREVYDARVRQMAASGELRALYQRWNSEVPGAVQALSAQ |
| 1WDN Chain:A ((4-224)) | ------------------------------------------KLVVATDTAFVPFEFKQGDLYVGFDVDLWAAIAKELKLDYELKPMDFSGIIPALQTKNVDLALAGITITD--ERKKAIDFSD-GYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPNIDNAYMELGTNRADAVLHDTPNILYFIKTAG--NGQFKAVGDSLEA-QQYGIAFPKGS--DELRDKVNGALKTLRENGTYNEIYKKWFGTE---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53107 for 1631 contacts (-32.6/contact) +
2D Compatibility (PS) -22572 + (NN) -5866 + (LL) 3524
1D Compatibility (HY) -8000 + (ID) 1350
Total energy: -87371.0 ( -53.57 by residue)
QMean score : 0.436
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