Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MNNLALWSRPVWDVEPW-DRWLRDFFGPAATTDWYRPVAG---------DFTPAAEIVKDGDDAVVRLELPGIDVDKDVNV----ELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPAHVTSEAIAASYDA-GVLTVRVAGAYKAPAETQAQRIAITK------------ |
| 2YGD Chain:A ((1-175)) | MDIAIHHPWIRRPFFPFHSPSRLFDQFFGEHLLESDLFPTSTSLSPFYLRPPSFLRAPSWFDTGLSEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDE----------HGFISREFHRKYRIPADVDPLTITSSLSSDGVLTVN---GPRKQVSGPERTIPITREEKPAVTAAPKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YGD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1328 for 874 contacts (-1.5/contact) +
2D Compatibility (PS) -14595 + (NN) -3980 + (LL) 128
1D Compatibility (HY) -5200 + (ID) 1750
Total energy: -26725.0 ( -30.58 by residue)
QMean score : 0.062
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