Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTELQAKDPQVLHTSGASPSPPHIGSPLLARLDSGPFQGSQHSDVSSVVSPIPISLDGLLFPRSCRGPELPDGKTGDQQSLSDVEGAFSGVEATHREGGRNSRPPEKDSRLLDSVLDSLLTPSGPEQSHASPPACEAITSWCLFGPELPEDPRSVPATKGLLSPLMSRPEIKVGDQSGTGRGQKVLPKGLSPPRQLLLPTSGSAHWPGAGVKPSPQPAAGEVEEDSGLETEGSASPLLKSKPRALEGTGQGGGVAANAPSAAPGGVTLVPKEDSRFSAPRVSLEQDSPIAPGRSPLATTVVDFIHVPILPLNHALLAARTRQLLEGESYDGGATAGPFCPPRSPSAPSTPVPRGDFPDCTYPLEGDPKEDVFPLYGDFQTPGLKIKEEEEGADAAVRSPRPYLSAGASSSTFPDFPLAPAPQAAPSSRPGEAAVAGGPSSAAVSPASSSGSALECILYKAEAPPTQGSFAPLPCKPPAAASCLLPRDSLPAAPGTAAAPAIYQPLGLNGLPQLGYQAAVLKDSLPQVYPPYLNYLRPDSEASQSPQYGFDSLPQKICLICGDEASGCHYGVLTCGSCKVFFKRAMEGQHNYLCAGRNDCIVDKIRRKNCPACRLRKCCQAGMVLGGRKFKKFNKVRVMRTLDGVALPQSVGLPNESQALSQRITFSPNQEIQLVPPLINLLMSIEPDVIYAGHDNTKPDTSSSLLTSLNQLGERQLLSVVKWSKSLPGFRNLHIDDQITLIQYSWMSLMVFGLGWRSYKHVSGQ---MLYFAPDLILNEQRMKEL-SFYSLCLTMWQIPQEFVKLQVTHEEFLCMKVLLLLNTI--PLEGLRSQSQFEEMRSSYIRELIKAIGLRQKGVVPTSQRFYQLTKLLDSLHDLVKQLHLYCLNTFIQSRTLAVEFPEMMSEVIAAQLPKILAGMVKPLLFHKK |
1A28 Chain:A ((5-255)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLIPPLINLLMSIEPD---------------------VIYAGHDN-------TKPDT------------SSSLLTSLNQLGERQLLSVVKWSKSLPGFRNLHIDDQITLIQYSWMSLMVFGLGWRSYKHVSG-QMLYFA--PDLILNEQRMK-ESSFYSLCLTMWQIPQEFVKLQVSQEEFLCMKVLLLLNTIPL--EGLRSQTQFEEMRSSYIRELIKAIGLRQKGVVSSSQRFYQLTKLLDNLHDLVKQLHLYCLNTFIQSRALSVEFPEMMSEVIAAQLPKILAGMVKPLLFHK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169053 for 1888 contacts (-89.5/contact) +
2D Compatibility (PS) -25538 + (NN) -8331 + (LL) 22940
1D Compatibility (HY) -36800 + (ID) 10350
Total energy: -227132.0 ( -120.30 by residue)
QMean score : 0.739
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