Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNVSGCPGAGNASQAGGGGGWHPEAVIVPLLFALIFLVGTVGNTLVLAVLLRGGQAVSTTNLFILNLGVADLCFILCCVPFQATIYTLDGWVFGSLLCKAVHFLIFLTMHASSFTLAAVSLDRYLAIRYPLHSRELRTPRNALAAIGLIWGLSLLFSGPYLSYYRQSQLANLTVCHPAWSAPR---RRAMDICTFVFSYLLPVLVLGLTYARTLRYLWRAVDPVAAGSGAR-RAKRKVTRMILIVAALFCLCWMPHHALILCVWF-----GQFPLTRATYALRILSHLVSYANSCVNPIVYALVSKHFRKGFRTICAGLLGRAPGRASGRVCAAARGTHSGSVLERESSDLLHMSEAAGALRPCPGASQPCILEPCPGPSWQGPKAGDSILTVDVA |
| 4RWA Chain:B ((122-403)) | ------------------------AIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALAD-ALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLR----------GSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVI-VWTLVDIDRRDPLVVAALHLCI---ALGYANSSLNPVLYAFLDENFKRCFR----------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -265091 for 2029 contacts (-130.7/contact) +
2D Compatibility (PS) -27562 + (NN) -10685 + (LL) 4128
1D Compatibility (HY) -27200 + (ID) 4550
Total energy: -330960.0 ( -163.11 by residue)
QMean score : 0.385
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