Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------MMSFLHIV-------------FSILVVVAFILGNFANGFIALINFIAWVKR--QKISSADQIIAALAVSRVGLLWVILLHWYSTVLNP-TSSNLKVIIFISNAWAVTNHF----SIWLATSLSIFY------LLKIVNFSRLIFHHLKRKAKSVVLV-------------IVLGSLFFLVCHLVMKH-TYINVWTEECEGNVTWKIKLRNAMHLSNLTVAMLANLI------PFT------------LTLISFLLLIYSL--CKHLKKMQL--HGKGSQDPSTKIHIKALQTVTSFLILLAIY--FLCLIISFWNFKMRP--KEIVLMLCQAF------GIIYPSFHSFILIWGNKTLKQTFLSVLWQVTCWAKGQNQSTP-- |
| 4D10 Chain:B ((34-447)) | VDLENQYYNSKALKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKINFKLTNFPEMMNRYKQLLTYIRSAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDAKNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQTQLLEIYALEIQMYTAQKNNKKLKALYEQSLHIKSAIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDES-GSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQVNQLLELDHQKRGGARYTALDKWTNQLNSLNQAVVSKLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D10.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -245708 for 2034 contacts (-120.8/contact) +
2D Compatibility (PS) -31716 + (NN) -17741 + (LL) 176
1D Compatibility (HY) -8400 + (ID) 2550
Total energy: -305939.0 ( -150.41 by residue)
QMean score : 0.256
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