Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSAGLGLLMLVAVVEFLIGLIGNGSLVVWSFREWIRKFNWSSYNLIILGLAGCRFLLQWLIILDLSLFP----LFQSSRWLRYLSIFWVLVSQASLWFATFLSVFYCKKITTFDRPAYLWLKQRAYNLSLWCLLGYFIINLLLTVQIGLTFY-HP-PQGNSSIRYPFESW-QYLYAFQLNSGSYLPLVVFLVSSGMLIVSLYTHHKKMKVHSA-----------------------------------------------------------------------------------------------------------------------------------GR-----------------RDVRAKAHITALKSLGCFLLLHLVYIMASPFSITSKTYP-P--DLTSVFIWETLMAAYPSLHSLILIMGIPRVKQTCQKILWKTVCARRCWGP |
| 3RZE Chain:A ((9-443)) | ------MPLVVVLSTICLVTVGLNLLVLYAVRSE---RKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLSMDYVASTASIFSVFILCIDRYRSVQQPLR-YLKYRTK---TRAS----ATILGAWFLSFLWVIPILGWNH--RREDKCETDFYDVTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNCCNEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHI---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RZE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204584 for 1956 contacts (-104.6/contact) +
2D Compatibility (PS) -27555 + (NN) -9739 + (LL) 2248
1D Compatibility (HY) -16800 + (ID) 1650
Total energy: -258080.0 ( -131.94 by residue)
QMean score : 0.284
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