Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVGDTLKLLSPLMTRYFFLLFYSTDSSDLNENQHPLDFDEMAFGKVKSGISFLIQTGVGILGNSFLLCFYNLILFTGHKLRPTD---LILSQLALANSMVLFFKGIPQTMAAFG----LKYLLNDTGCKFVFYYHRVGTRVSLSTICLLNGFQAIKLNPSICRWMEIKIRSPRFIDFCCLLCWAPHVLMNASVLLLV---NGPLNSKNSSAKNNYGYCSYKASKRF-----SSLHAVLYFSPDFMSLGFMVWASGSMVFFLYRHKQQVQHNHSNRLSCRPSQEARATHTIMVLVSSFFVFYSVHSFLTIWTTVVANPGQWIVTNSVLVASCFPARSPFVLIMSDTHISQFCFACRTRKTLFPNLVVMP |
| 3LRV Chain:A ((11-343)) | ---------APKWPILKNLELLQAQNYSRNIKTFP--YKELNKSMYYDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPAIISR-GPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNTEYFIWADNRGTIGFQSYEDDS------QYIVHSAKSD-----VEYSSGVLHKDSLLLALYSPDGILDVYNLSSPD-------QASSRFPVDEEAKIKEVKFADNGY---WMVVECDQTVVCFDLR-------KDVGTLAYPTYTIGTVTYDIDDSGKNMIAYSNESNSLTIYKFD-KKTKNWTKDEESAL--CLADFTDMDVVCGDGGIAAILK----TNDSFNIVALTP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LRV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -252084 for 2346 contacts (-107.5/contact) +
2D Compatibility (PS) -32765 + (NN) -1074 + (LL) 3884
1D Compatibility (HY) -10400 + (ID) 2650
Total energy: -295089.0 ( -125.78 by residue)
QMean score : 0.225
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