Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MLKLVIIENMAEIMLFSLDLLLFSTDILCFNFPSKMIKLPGFI-------TIQIFFYPQASFGISANTILLLFHIFTFVFS--HRSKSIDMIISHLSLIHILLLFTQAILVSLDFFGSQNTQDDLRYKVIVFLNKVMRGLSICTPCLLSVLQAIISPSIFSLAKLKHPSASHILGFFLFSWVLNMFIGVIFCCTLRLPPVKRGQSSVCHTALFLFAHELHPQETVFHTNDFEGCHLYRVHGPLKRLHGDYFIQTIRGYLSAFTQPACPRVSPVKRASQAILLLVSFVFTYWVDFT-FSFSGGVTWINDSLLVWLQVIVANSYAAISPLMLIYADNQIFKTLQMLWFKYLSPP---KLMLKFNRQCGSTKK |
| 4XGC Chain:B ((62-352)) | EGSINAIMEEYRSYFPKWMCILNEGFNILLYGLGSKHQLLQSFHREVLHKQTVLVVNGFFPSLTIKDMLDSITSDILDAGISPANPHEAVDMIEEEFALIPETHLF--LIVHNLD--GAMLR----NVKAQAILSRLAR---IPNIHLLASIDHINTPLLWDQGKLCS---------FNFSWWD---------CTTMLP---------------------YTNETAFENSLLV-----------------LALSSMRSVFSSLT----------TNSRGIYMLIVKYQLKNKGNATGMPFRDLYSSCREAFLV-------SSDLALRAQLTEFLDHKLVKSKRSS--EQLTIPIDGALLQQFLEEQE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240746 for 1932 contacts (-124.6/contact) +
2D Compatibility (PS) -28057 + (NN) -6762 + (LL) 5956
1D Compatibility (HY) -12000 + (ID) 3150
Total energy: -284759.0 ( -147.39 by residue)
QMean score : 0.167
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